Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 U82695.1-201ENST00000635752 1889 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 PCDHA14-201ENST00000506751 2298 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 Z97180.1-201ENST00000445173 988 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AC009486.1-201ENST00000569860 813 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AC026410.3-201ENST00000514280 936 ntBASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 CD8B2-202ENST00000417670 633 ntBASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 HOMER2P2-201ENST00000451621 847 ntBASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSMD1Q96PZ7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 AC097065.1-201ENST00000425737 517 ntBASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CSMD1Q96PZ7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 KRT8P39-201ENST00000396270 1433 ntBASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 RNA5SP486-201ENST00000515961 83 ntBASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms