Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 RHOQP3-201ENST00000437982 621 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AC087163.2-201ENST00000457299 853 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AC023141.13-201ENST00000604991 943 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AC004877.2-201ENST00000623941 599 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AC010507.1-201ENST00000633895 436 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 AL353732.1-201ENST00000569618 1459 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 BCAR1-209ENST00000546196 1340 ntBASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RAB40AQ8WXH6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
RAB40AQ8WXH6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 FAM185BP-201ENST00000443595 716 ntBASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 AC087641.1-201ENST00000557561 1021 ntBASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 AC092865.6-201ENST00000642101 219 ntBASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 MYO15B-237ENST00000642007 4893 ntBASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40AQ8WXH6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms