Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC087499.5-201ENST00000452760 1342 ntBASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
FNDC9Q8TBE3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC022144.1-201ENST00000602255 1580 ntBASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC245100.5-201ENST00000452108 331 ntBASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.39□□□□□ -0.11
FNDC9Q8TBE3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KRT8P12-202ENST00000472924 1397 ntBASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 LINC02084-201ENST00000606069 1096 ntBASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AL844908.2-201ENST00000609461 460 ntBASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms