Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 CYP4F24P-201ENST00000586049 1580 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC055876.3-201ENST00000431496 288 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC093214.1-201ENST00000511688 1107 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC011467.4-201ENST00000594891 528 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AL390955.2-201ENST00000603032 514 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC138649.4-201ENST00000612222 287 ntBASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCC2Q8TAQ2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.64■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
SMARCC2Q8TAQ2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCC2Q8TAQ2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 TMBIM7P-203ENST00000641617 1718 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC090616.6-203ENST00000579186 1945 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 MTND6P24-201ENST00000440466 518 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AC105021.1-202ENST00000570572 669 ntBASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCC2Q8TAQ2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms