Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 AP002472.1-201ENST00000577490 586 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 AC021097.1-201ENST00000607902 574 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 AL078644.1-201ENST00000609881 752 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 GGT4P-201ENST00000623672 1708 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 FAM58CP-201ENST00000435741 640 ntBASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 AC092865.5-201ENST00000545435 363 ntBASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 AC091812.2-201ENST00000619081 385 ntBASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.24■□□□□ 0.19
CFAP61Q8NHU2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 PRAL-201ENST00000624952 3286 ntBASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 YBX2P1-201ENST00000394192 760 ntBASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 AC002056.1-201ENST00000395613 760 ntBASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 AC004832.2-201ENST00000426397 482 ntBASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.23■□□□□ 0.19
CFAP61Q8NHU2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms