Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 LINC01115-203ENST00000606068 577 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AC004790.1-201ENST00000612686 536 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AC063926.2-201ENST00000623766 1308 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 AC005034.1-201ENST00000426657 489 ntBASIC17.1■□□□□ 0.33
BEST2Q8NFU1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 MEIS3P1-201ENST00000495167 958 ntBASIC17.1■□□□□ 0.33
BEST2Q8NFU1 API5-211ENST00000534695 560 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 AC027307.3-201ENST00000594262 1100 ntBASIC17.1■□□□□ 0.33
BEST2Q8NFU1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 AL358472.5-202ENST00000641448 1267 ntBASIC17.1■□□□□ 0.33
BEST2Q8NFU1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 AC018892.3-201ENST00000623986 2499 ntBASIC17.1■□□□□ 0.33
BEST2Q8NFU1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST2Q8NFU1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AC087499.6-201ENST00000411576 835 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AC074338.1-201ENST00000416825 156 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 RPL13P2-201ENST00000440687 659 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AC055876.2-201ENST00000531834 546 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 CR383656.12-201ENST00000549567 513 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AL596325.1-201ENST00000563991 1082 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AC097359.3-201ENST00000603982 1210 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 AL391825.1-201ENST00000457671 1364 ntBASIC17.09■□□□□ 0.33
BEST2Q8NFU1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST2Q8NFU1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms