Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB43Q86YS6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB43Q86YS6 SNX33P1-201ENST00000592116 1762 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 PIN1P1-201ENST00000412108 996 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 SERBP1P5-201ENST00000510079 1181 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AC005225.4-201ENST00000557330 545 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 AC105021.1-202ENST00000570572 669 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AL035252.4-201ENST00000624174 288 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 AL365209.1-201ENST00000624418 6473 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 AC063926.2-201ENST00000623766 1308 ntBASIC15.31■□□□□ 0.04
RAB43Q86YS6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB43Q86YS6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB43Q86YS6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 CRB3P1-201ENST00000449338 276 ntBASIC15.3■□□□□ 0.04
RAB43Q86YS6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB43Q86YS6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms