Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AC136604.1-201ENST00000418535 575 ntBASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AC138761.1-201ENST00000584393 385 ntBASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM4Q86VH4 AC112504.1-201ENST00000623415 1841 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SPDYE18-201ENST00000510091 1050 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 DOC2GP-202ENST00000514950 1163 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 AC018892.3-201ENST00000623986 2499 ntBASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms