Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC022144.1-201ENST00000602255 1580 ntBASIC15.31■□□□□ 0.04
RNF44Q7L0R7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC069224.1-201ENST00000566372 1715 ntBASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 MRPS18AP1-201ENST00000414458 589 ntBASIC15.3■□□□□ 0.04
RNF44Q7L0R7 PCDH8P1-201ENST00000428983 2773 ntBASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF44Q7L0R7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AZGP1P1-201ENST00000411909 902 ntBASIC15.29■□□□□ 0.04
RNF44Q7L0R7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.29■□□□□ 0.04
RNF44Q7L0R7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms