Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 AC079776.4-201ENST00000511039 504 ntBASIC16.1■□□□□ 0.17
RAPH1Q70E73 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 AC004877.2-201ENST00000623941 599 ntBASIC16.1■□□□□ 0.17
RAPH1Q70E73 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 CICP13-201ENST00000422015 2789 ntBASIC16.1■□□□□ 0.17
RAPH1Q70E73 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 PMS2P7-201ENST00000506558 1336 ntBASIC16.1■□□□□ 0.17
RAPH1Q70E73 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAPH1Q70E73 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RAPH1Q70E73 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 OR2I1P-210ENST00000642037 4691 ntBASIC16.09■□□□□ 0.17
RAPH1Q70E73 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC245100.5-201ENST00000452108 331 ntBASIC16.09■□□□□ 0.17
RAPH1Q70E73 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 RNA5SP419-201ENST00000515908 135 ntBASIC16.09■□□□□ 0.17
RAPH1Q70E73 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC018845.2-201ENST00000568326 409 ntBASIC16.09■□□□□ 0.17
RAPH1Q70E73 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 AL589702.1-201ENST00000641229 1509 ntBASIC16.09■□□□□ 0.17
RAPH1Q70E73 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAPH1Q70E73 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.09■□□□□ 0.17
RAPH1Q70E73 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAPH1Q70E73 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.08■□□□□ 0.17
RAPH1Q70E73 PPT1-215ENST00000641471 2368 ntBASIC16.08■□□□□ 0.17
RAPH1Q70E73 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.08■□□□□ 0.17
RAPH1Q70E73 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAPH1Q70E73 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms