Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 AL031731.1-201ENST00000642131 2094 ntBASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFPL4BQ6ZWI9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 GGT4P-201ENST00000623672 1708 ntBASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 AC074386.1-202ENST00000463561 864 ntBASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL4BQ6ZWI9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 PTENP1-202ENST00000532280 3996 ntBASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 COL6A4P2-202ENST00000504443 2753 ntBASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 AC140658.5-201ENST00000438532 169 ntBASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 MIR3909-201ENST00000579518 119 ntBASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 AL009183.1-201ENST00000603760 355 ntBASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL4BQ6ZWI9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms