Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 AL450487.1-201ENST00000426799 995 ntBASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMARCD3Q6STE5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 MRPL3P1-201ENST00000400109 1033 ntBASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 RNA5SP419-201ENST00000515908 135 ntBASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 Z83851.2-201ENST00000609564 659 ntBASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 BCAR1-209ENST00000546196 1340 ntBASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 TMBIM7P-203ENST00000641617 1718 ntBASIC14.61□□□□□ -0.07
SMARCD3Q6STE5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 WASH6P-202ENST00000359512 1437 ntBASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 AC025580.3-201ENST00000617932 1424 ntBASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.6□□□□□ -0.07
SMARCD3Q6STE5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms