Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CXCL1P1-201ENST00000502804 216 ntBASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 AC107918.2-201ENST00000530817 355 ntBASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 MPDU1-223ENST00000582151 728 ntBASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 LINC00895-201ENST00000629028 1637 ntBASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 HCG4-201ENST00000418983 998 ntBASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 AC013467.2-201ENST00000605472 835 ntBASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 AC027601.5-201ENST00000624065 2482 ntBASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM53Q6P2H8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 SBF1P1-201ENST00000444527 5631 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms