Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF43Q68DV7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF43Q68DV7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF43Q68DV7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RNF43Q68DV7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.77■□□□□ 0.27
RNF43Q68DV7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 ATP5G2P4-201ENST00000442175 420 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 KRT17P7-201ENST00000451704 1104 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 HLA-V-204ENST00000476601 1289 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 SERBP1P5-201ENST00000510079 1181 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AL133215.2-201ENST00000609242 977 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AC073347.1-201ENST00000421633 2643 ntBASIC16.76■□□□□ 0.27
RNF43Q68DV7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF43Q68DV7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF43Q68DV7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 FAM45BP-202ENST00000592932 1624 ntBASIC16.75■□□□□ 0.27
RNF43Q68DV7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 SPDYE22P-201ENST00000582158 798 ntBASIC16.75■□□□□ 0.27
RNF43Q68DV7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 AC010491.1-201ENST00000563101 2797 ntBASIC16.75■□□□□ 0.27
RNF43Q68DV7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF43Q68DV7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF43Q68DV7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 AC013268.4-201ENST00000637413 2228 ntBASIC16.74■□□□□ 0.27
RNF43Q68DV7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RNF43Q68DV7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF43Q68DV7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms