Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 AF228730.6-201ENST00000641497 218 ntBASIC17.39■□□□□ 0.37
NCKAP1LP55160 AC084121.3-201ENST00000641716 218 ntBASIC17.39■□□□□ 0.37
NCKAP1LP55160 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 AC015922.1-201ENST00000421102 1152 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 AC104794.3-201ENST00000566840 1248 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 SRD5A3P1-201ENST00000603021 949 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.38■□□□□ 0.37
NCKAP1LP55160 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1LP55160 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1LP55160 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 CICP6-201ENST00000457191 2729 ntBASIC17.37■□□□□ 0.37
NCKAP1LP55160 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 FAM207CP-201ENST00000443486 507 ntBASIC17.37■□□□□ 0.37
NCKAP1LP55160 AL589987.1-201ENST00000453380 819 ntBASIC17.37■□□□□ 0.37
NCKAP1LP55160 SERBP1P5-201ENST00000510079 1181 ntBASIC17.37■□□□□ 0.37
NCKAP1LP55160 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NCKAP1LP55160 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1LP55160 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 TOMM22P5-201ENST00000416399 439 ntBASIC17.36■□□□□ 0.37
NCKAP1LP55160 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms