Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.07■□□□□ 0.32
RAD23BP54727 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.07■□□□□ 0.32
RAD23BP54727 AL080243.2-201ENST00000418783 582 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 AC092580.3-201ENST00000430932 139 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 AC069120.2-201ENST00000524091 540 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 RFPL4AP1-201ENST00000530883 850 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 AL138828.2-201ENST00000615812 383 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.07■□□□□ 0.32
RAD23BP54727 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RAD23BP54727 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAD23BP54727 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RAD23BP54727 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.07■□□□□ 0.32
RAD23BP54727 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.06■□□□□ 0.32
RAD23BP54727 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAD23BP54727 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 REXO1L1P-202ENST00000608646 1974 ntBASIC17.06■□□□□ 0.32
RAD23BP54727 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RAD23BP54727 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 TREML5P-201ENST00000421694 576 ntBASIC17.06■□□□□ 0.32
RAD23BP54727 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.06■□□□□ 0.32
RAD23BP54727 HIST3H2BA-201ENST00000436555 524 ntBASIC17.06■□□□□ 0.32
RAD23BP54727 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RAD23BP54727 HLA-V-204ENST00000476601 1289 ntBASIC17.06■□□□□ 0.32
RAD23BP54727 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.06■□□□□ 0.32
RAD23BP54727 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.06■□□□□ 0.32
RAD23BP54727 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.06■□□□□ 0.32
RAD23BP54727 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 AC093512.1-201ENST00000617969 520 ntBASIC17.06■□□□□ 0.32
RAD23BP54727 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.06■□□□□ 0.32
RAD23BP54727 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAD23BP54727 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAD23BP54727 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD23BP54727 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RAD23BP54727 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD23BP54727 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 FO538757.1-201ENST00000623083 1397 ntBASIC17.05■□□□□ 0.32
RAD23BP54727 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 AC018892.3-201ENST00000623986 2499 ntBASIC17.05■□□□□ 0.32
RAD23BP54727 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD23BP54727 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 AC097493.3-201ENST00000509725 367 ntBASIC17.05■□□□□ 0.32
RAD23BP54727 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD23BP54727 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD23BP54727 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD23BP54727 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD23BP54727 AC073592.8-201ENST00000624126 511 ntBASIC17.05■□□□□ 0.32
RAD23BP54727 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD23BP54727 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD23BP54727 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms