Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
RNF144AP50876 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 MIR648-201ENST00000385046 94 ntBASIC14.89□□□□□ -0.03
RNF144AP50876 HAUS4P1-201ENST00000406739 1145 ntBASIC14.89□□□□□ -0.03
RNF144AP50876 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF144AP50876 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF144AP50876 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF144AP50876 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF144AP50876 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF144AP50876 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 AP005117.1-202ENST00000581724 1908 ntBASIC14.88□□□□□ -0.03
RNF144AP50876 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF144AP50876 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
RNF144AP50876 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF144AP50876 AC211486.1-202ENST00000416371 468 ntBASIC14.88□□□□□ -0.03
RNF144AP50876 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 AC211476.1-201ENST00000503899 468 ntBASIC14.88□□□□□ -0.03
RNF144AP50876 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
RNF144AP50876 MTND2P7-201ENST00000521337 640 ntBASIC14.88□□□□□ -0.03
RNF144AP50876 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF144AP50876 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
RNF144AP50876 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF144AP50876 AC073389.1-201ENST00000595595 795 ntBASIC14.88□□□□□ -0.03
RNF144AP50876 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF144AP50876 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF144AP50876 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF144AP50876 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms