Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA3P32297 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA3P32297 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 AL139400.1-201ENST00000366220 510 ntBASIC16.85■□□□□ 0.29
CHRNA3P32297 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA3P32297 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA3P32297 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA3P32297 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA3P32297 AC093520.2-201ENST00000561830 333 ntBASIC16.85■□□□□ 0.29
CHRNA3P32297 AC027796.2-201ENST00000575326 344 ntBASIC16.85■□□□□ 0.29
CHRNA3P32297 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
CHRNA3P32297 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA3P32297 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA3P32297 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA3P32297 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA3P32297 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA3P32297 SPCS2P4-201ENST00000436160 681 ntBASIC16.84■□□□□ 0.29
CHRNA3P32297 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA3P32297 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA3P32297 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA3P32297 AL365330.1-201ENST00000607459 531 ntBASIC16.84■□□□□ 0.29
CHRNA3P32297 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 CICP13-201ENST00000422015 2789 ntBASIC16.84■□□□□ 0.29
CHRNA3P32297 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 AC087481.3-201ENST00000602886 1894 ntBASIC16.84■□□□□ 0.29
CHRNA3P32297 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA3P32297 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA3P32297 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA3P32297 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHRNA3P32297 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA3P32297 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA3P32297 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHRNA3P32297 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA3P32297 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA3P32297 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA3P32297 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms