Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HTR1EP28566 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.33■□□□□ 0.04
HTR1EP28566 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 AC138761.1-201ENST00000584393 385 ntBASIC15.33■□□□□ 0.04
HTR1EP28566 AC023141.13-201ENST00000604991 943 ntBASIC15.33■□□□□ 0.04
HTR1EP28566 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1EP28566 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1EP28566 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1EP28566 AC012569.1-201ENST00000591191 1524 ntBASIC15.33■□□□□ 0.04
HTR1EP28566 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.33■□□□□ 0.04
HTR1EP28566 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 RHOQP3-201ENST00000437982 621 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 MIR4745-201ENST00000577608 62 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 AC021097.1-201ENST00000607902 574 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 AL513210.1-201ENST00000629608 234 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.32■□□□□ 0.04
HTR1EP28566 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1EP28566 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1EP28566 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1EP28566 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HTR1EP28566 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 AC105250.1-201ENST00000509378 2057 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 NORAD-201ENST00000565493 5339 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms