Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 TPM3P8-201ENST00000330554 643 ntBASIC19.23■□□□□ 0.67
KCNA3P22001 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
KCNA3P22001 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNA3P22001 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 IQSEC3P1-201ENST00000538799 536 ntBASIC19.23■□□□□ 0.67
KCNA3P22001 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNA3P22001 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNA3P22001 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA3P22001 AC020916.1-201ENST00000587762 1774 ntBASIC19.23■□□□□ 0.67
KCNA3P22001 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
KCNA3P22001 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA3P22001 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA3P22001 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNA3P22001 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KCNA3P22001 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 NUP210P1-202ENST00000504322 710 ntBASIC19.22■□□□□ 0.67
KCNA3P22001 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNA3P22001 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNA3P22001 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 MIR4750-201ENST00000584564 56 ntBASIC19.22■□□□□ 0.67
KCNA3P22001 AL353726.2-201ENST00000623259 884 ntBASIC19.22■□□□□ 0.67
KCNA3P22001 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNA3P22001 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNA3P22001 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA3P22001 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA3P22001 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
KCNA3P22001 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 ACTG1P2-201ENST00000415776 1125 ntBASIC19.21■□□□□ 0.67
KCNA3P22001 ACTG1P11-201ENST00000425411 1125 ntBASIC19.21■□□□□ 0.67
KCNA3P22001 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KCNA3P22001 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNA3P22001 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNA3P22001 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNA3P22001 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA3P22001 AC022748.3-201ENST00000621828 275 ntBASIC19.21■□□□□ 0.67
KCNA3P22001 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNA3P22001 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA3P22001 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNA3P22001 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA3P22001 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNA3P22001 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms