Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM21P19474 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRIM21P19474 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM21P19474 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM21P19474 AP000344.2-201ENST00000512987 629 ntBASIC17.65■□□□□ 0.42
TRIM21P19474 AL135744.1-201ENST00000565098 629 ntBASIC17.65■□□□□ 0.42
TRIM21P19474 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRIM21P19474 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRIM21P19474 AL365330.1-201ENST00000607459 531 ntBASIC17.65■□□□□ 0.42
TRIM21P19474 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.65■□□□□ 0.42
TRIM21P19474 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM21P19474 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM21P19474 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM21P19474 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM21P19474 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM21P19474 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM21P19474 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM21P19474 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 SSR4P1-203ENST00000599569 2260 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 AC254562.1-201ENST00000417586 456 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 AC245100.5-201ENST00000452108 331 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 TIMM8BP1-201ENST00000452384 211 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM21P19474 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM21P19474 AC099522.2-201ENST00000607001 744 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 CICP13-201ENST00000422015 2789 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM21P19474 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 AC136621.1-201ENST00000624017 2304 ntBASIC17.64■□□□□ 0.41
TRIM21P19474 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM21P19474 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms