Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 AL133267.1-201ENST00000398220 340 ntBASIC17.56■□□□□ 0.4
SMPD1P17405 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 RPL13AP20-201ENST00000459725 609 ntBASIC17.56■□□□□ 0.4
SMPD1P17405 GAPDHP40-201ENST00000505218 1006 ntBASIC17.56■□□□□ 0.4
SMPD1P17405 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.56■□□□□ 0.4
SMPD1P17405 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.56■□□□□ 0.4
SMPD1P17405 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 AC011477.6-201ENST00000604980 1927 ntBASIC17.56■□□□□ 0.4
SMPD1P17405 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMPD1P17405 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.56■□□□□ 0.4
SMPD1P17405 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMPD1P17405 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 CNN2P8-201ENST00000421872 913 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 C2orf27AP3-201ENST00000434123 579 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.55■□□□□ 0.4
SMPD1P17405 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.55■□□□□ 0.4
SMPD1P17405 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.55■□□□□ 0.4
SMPD1P17405 MIR4313-201ENST00000580760 101 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 AL354718.3-201ENST00000616414 581 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 CR382287.1-201ENST00000623954 586 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 AC008687.7-202ENST00000637404 953 ntBASIC17.55■□□□□ 0.4
SMPD1P17405 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMPD1P17405 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMPD1P17405 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.54■□□□□ 0.4
SMPD1P17405 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMPD1P17405 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SMPD1P17405 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SMPD1P17405 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.54■□□□□ 0.4
SMPD1P17405 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.54■□□□□ 0.4
SMPD1P17405 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SMPD1P17405 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.54■□□□□ 0.4
SMPD1P17405 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.54■□□□□ 0.4
SMPD1P17405 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMPD1P17405 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.54■□□□□ 0.4
SMPD1P17405 AC025279.2-201ENST00000569730 653 ntBASIC17.54■□□□□ 0.4
SMPD1P17405 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.54■□□□□ 0.4
SMPD1P17405 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.54■□□□□ 0.4
SMPD1P17405 AC244093.1-201ENST00000610837 814 ntBASIC17.54■□□□□ 0.4
SMPD1P17405 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMPD1P17405 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.53■□□□□ 0.4
SMPD1P17405 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms