Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 AP001282.1-201ENST00000531301 1499 ntBASIC13.93□□□□□ -0.18
CCL2P13500 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.93□□□□□ -0.18
CCL2P13500 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 NORAD-201ENST00000565493 5339 ntBASIC13.93□□□□□ -0.18
CCL2P13500 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL2P13500 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL2P13500 MIR943-201ENST00000401286 94 ntBASIC13.93□□□□□ -0.18
CCL2P13500 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCL2P13500 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL2P13500 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL2P13500 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL2P13500 AC051619.7-201ENST00000568314 623 ntBASIC13.93□□□□□ -0.18
CCL2P13500 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCL2P13500 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL2P13500 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.93□□□□□ -0.18
CCL2P13500 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL2P13500 AL035456.1-201ENST00000456064 1369 ntBASIC13.93□□□□□ -0.18
CCL2P13500 FO538757.1-201ENST00000623083 1397 ntBASIC13.93□□□□□ -0.18
CCL2P13500 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCL2P13500 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL2P13500 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL2P13500 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL2P13500 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL2P13500 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL2P13500 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.92□□□□□ -0.18
CCL2P13500 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCL2P13500 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL2P13500 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL2P13500 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CCL2P13500 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL2P13500 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL2P13500 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.92□□□□□ -0.18
CCL2P13500 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL2P13500 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL2P13500 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 AC067863.1-201ENST00000494933 530 ntBASIC13.92□□□□□ -0.18
CCL2P13500 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.92□□□□□ -0.18
CCL2P13500 IGHV3-42-201ENST00000520410 361 ntBASIC13.92□□□□□ -0.18
CCL2P13500 AC069120.2-201ENST00000524091 540 ntBASIC13.92□□□□□ -0.18
CCL2P13500 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 AC027796.2-201ENST00000575326 344 ntBASIC13.92□□□□□ -0.18
CCL2P13500 SPDYE12P-201ENST00000618416 771 ntBASIC13.92□□□□□ -0.18
CCL2P13500 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL2P13500 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL2P13500 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL2P13500 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms