Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MS4A1P11836 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.52■□□□□ 0.87
MS4A1P11836 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MS4A1P11836 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 RPS8P6-201ENST00000426177 609 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.51■□□□□ 0.87
MS4A1P11836 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.51■□□□□ 0.87
MS4A1P11836 AL671883.3-201ENST00000603274 991 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 AC026979.3-201ENST00000607315 403 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 AC134407.2-201ENST00000625089 1978 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.51■□□□□ 0.87
MS4A1P11836 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
MS4A1P11836 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.51■□□□□ 0.87
MS4A1P11836 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A1P11836 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
MS4A1P11836 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
MS4A1P11836 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
MS4A1P11836 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A1P11836 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 UXT-AS1-201ENST00000590504 1525 ntBASIC20.49■□□□□ 0.87
MS4A1P11836 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MS4A1P11836 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 CEND1P1-201ENST00000451006 455 ntBASIC20.49■□□□□ 0.87
MS4A1P11836 AL139010.1-201ENST00000454878 894 ntBASIC20.49■□□□□ 0.87
MS4A1P11836 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.49■□□□□ 0.87
MS4A1P11836 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms