Protein–RNA interactions for Protein: P10071

GLI3, Transcriptional activator GLI3, humanhuman

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3P10071 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GLI3P10071 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.56■□□□□ 0.88
GLI3P10071 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GLI3P10071 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 FAM8A4P-201ENST00000435433 1213 ntBASIC20.55■□□□□ 0.88
GLI3P10071 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GLI3P10071 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GLI3P10071 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 AC005332.8-201ENST00000622750 2735 ntBASIC20.55■□□□□ 0.88
GLI3P10071 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.55■□□□□ 0.88
GLI3P10071 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.55■□□□□ 0.88
GLI3P10071 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 MIR1227-201ENST00000408484 88 ntBASIC20.55■□□□□ 0.88
GLI3P10071 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.55■□□□□ 0.88
GLI3P10071 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.55■□□□□ 0.88
GLI3P10071 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.55■□□□□ 0.88
GLI3P10071 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.55■□□□□ 0.88
GLI3P10071 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.55■□□□□ 0.88
GLI3P10071 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.55■□□□□ 0.88
GLI3P10071 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.55■□□□□ 0.88
GLI3P10071 AC020922.3-201ENST00000595064 547 ntBASIC20.55■□□□□ 0.88
GLI3P10071 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GLI3P10071 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GLI3P10071 AL138799.1-201ENST00000448213 1675 ntBASIC20.54■□□□□ 0.88
GLI3P10071 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 AC092171.3-201ENST00000610122 2651 ntBASIC20.54■□□□□ 0.88
GLI3P10071 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GLI3P10071 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.54■□□□□ 0.88
GLI3P10071 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GLI3P10071 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.54■□□□□ 0.88
GLI3P10071 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.54■□□□□ 0.88
GLI3P10071 MARK2P5-201ENST00000507649 634 ntBASIC20.54■□□□□ 0.88
GLI3P10071 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.54■□□□□ 0.88
GLI3P10071 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
GLI3P10071 AC025181.2-201ENST00000606994 802 ntBASIC20.54■□□□□ 0.88
GLI3P10071 ZACNP1-201ENST00000612259 710 ntBASIC20.54■□□□□ 0.88
GLI3P10071 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
GLI3P10071 ENPP7P14-201ENST00000621765 1040 ntBASIC20.54■□□□□ 0.88
GLI3P10071 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 AL805961.1-201ENST00000642026 753 ntBASIC20.54■□□□□ 0.88
GLI3P10071 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GLI3P10071 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GLI3P10071 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.53■□□□□ 0.88
GLI3P10071 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.53■□□□□ 0.88
GLI3P10071 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.53■□□□□ 0.88
GLI3P10071 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.53■□□□□ 0.88
GLI3P10071 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 AC026316.1-201ENST00000398900 414 ntBASIC20.53■□□□□ 0.88
GLI3P10071 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.53■□□□□ 0.88
GLI3P10071 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 PRSS30P-206ENST00000641773 873 ntBASIC20.53■□□□□ 0.88
GLI3P10071 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GLI3P10071 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.53■□□□□ 0.88
GLI3P10071 ME2P1-201ENST00000426028 1970 ntBASIC20.53■□□□□ 0.88
GLI3P10071 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GLI3P10071 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 AC120498.9-201ENST00000339021 3867 ntBASIC20.53■□□□□ 0.88
GLI3P10071 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GLI3P10071 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GLI3P10071 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
GLI3P10071 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GLI3P10071 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GLI3P10071 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms