Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBCP0CG48 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
UBCP0CG48 AC136621.1-201ENST00000624017 2304 ntBASIC14.06□□□□□ -0.16
UBCP0CG48 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
UBCP0CG48 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 IGHV3-22-201ENST00000520721 359 ntBASIC14.05□□□□□ -0.16
UBCP0CG48 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBCP0CG48 AP001005.1-201ENST00000571755 1248 ntBASIC14.05□□□□□ -0.16
UBCP0CG48 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.05□□□□□ -0.16
UBCP0CG48 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.05□□□□□ -0.16
UBCP0CG48 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBCP0CG48 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.05□□□□□ -0.16
UBCP0CG48 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 OR2I1P-210ENST00000642037 4691 ntBASIC14.05□□□□□ -0.16
UBCP0CG48 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBCP0CG48 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.05□□□□□ -0.16
UBCP0CG48 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.05□□□□□ -0.16
UBCP0CG48 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
UBCP0CG48 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.04□□□□□ -0.16
UBCP0CG48 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.04□□□□□ -0.16
UBCP0CG48 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
UBCP0CG48 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.04□□□□□ -0.16
UBCP0CG48 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.04□□□□□ -0.16
UBCP0CG48 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBCP0CG48 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms