Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQA2P01906 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.4□□□□□ -0.11
HLA-DQA2P01906 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.4□□□□□ -0.11
HLA-DQA2P01906 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.4□□□□□ -0.11
HLA-DQA2P01906 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
HLA-DQA2P01906 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 AC074386.1-202ENST00000463561 864 ntBASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 RNA5SP416-201ENST00000516838 111 ntBASIC14.39□□□□□ -0.11
HLA-DQA2P01906 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 AL589702.1-201ENST00000641229 1509 ntBASIC14.39□□□□□ -0.11
HLA-DQA2P01906 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 AC073347.1-201ENST00000421633 2643 ntBASIC14.39□□□□□ -0.11
HLA-DQA2P01906 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 AC092384.3-202ENST00000564646 2873 ntBASIC14.39□□□□□ -0.11
HLA-DQA2P01906 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQA2P01906 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC002056.1-201ENST00000395613 760 ntBASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 KRT18P2-201ENST00000447938 1258 ntBASIC14.38□□□□□ -0.11
HLA-DQA2P01906 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC112191.1-201ENST00000523689 701 ntBASIC14.38□□□□□ -0.11
HLA-DQA2P01906 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms