Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFPL1O75677 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFPL1O75677 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
RFPL1O75677 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.04■□□□□ 0.16
RFPL1O75677 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFPL1O75677 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFPL1O75677 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFPL1O75677 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 AC091951.1-201ENST00000512854 2465 ntBASIC16.03■□□□□ 0.16
RFPL1O75677 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 TCAF2P1-201ENST00000291129 2421 ntBASIC16.03■□□□□ 0.16
RFPL1O75677 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.03■□□□□ 0.16
RFPL1O75677 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.03■□□□□ 0.16
RFPL1O75677 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.03■□□□□ 0.16
RFPL1O75677 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
RFPL1O75677 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 C18orf15-201ENST00000623680 2534 ntBASIC16.03■□□□□ 0.16
RFPL1O75677 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RFPL1O75677 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.03■□□□□ 0.16
RFPL1O75677 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
RFPL1O75677 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFPL1O75677 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.02■□□□□ 0.16
RFPL1O75677 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RFPL1O75677 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 FAM45BP-202ENST00000592932 1624 ntBASIC16.02■□□□□ 0.16
RFPL1O75677 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.02■□□□□ 0.16
RFPL1O75677 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.02■□□□□ 0.16
RFPL1O75677 AC140658.5-201ENST00000438532 169 ntBASIC16.02■□□□□ 0.16
RFPL1O75677 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFPL1O75677 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.02■□□□□ 0.16
RFPL1O75677 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFPL1O75677 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.02■□□□□ 0.16
RFPL1O75677 AC068137.2-201ENST00000605408 478 ntBASIC16.02■□□□□ 0.16
RFPL1O75677 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RFPL1O75677 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.02■□□□□ 0.15
RFPL1O75677 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.02■□□□□ 0.15
RFPL1O75677 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.02■□□□□ 0.15
RFPL1O75677 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms