Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 AL133373.2-201ENST00000623187 2828 ntBASIC6.94□□□□□ -1.3
USH2AO75445 RN7SKP214-201ENST00000364208 315 ntBASIC6.94□□□□□ -1.3
USH2AO75445 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 AC005632.3-201ENST00000605544 308 ntBASIC6.94□□□□□ -1.3
USH2AO75445 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC6.94□□□□□ -1.3
USH2AO75445 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 PSMD4P1-201ENST00000433951 1109 ntBASIC6.94□□□□□ -1.3
USH2AO75445 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC6.94□□□□□ -1.3
USH2AO75445 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 AC004554.1-201ENST00000422830 1468 ntBASIC6.94□□□□□ -1.3
USH2AO75445 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 OR2K2-202ENST00000374428 1038 ntBASIC6.94□□□□□ -1.3
USH2AO75445 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 IGKV1OR-2-201ENST00000457995 350 ntBASIC6.94□□□□□ -1.3
USH2AO75445 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
USH2AO75445 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
USH2AO75445 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC6.94□□□□□ -1.3
USH2AO75445 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USH2AO75445 LYPLA2P1-203ENST00000447689 696 ntBASIC6.94□□□□□ -1.3
USH2AO75445 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC6.94□□□□□ -1.3
USH2AO75445 AC073911.3-201ENST00000624401 631 ntBASIC6.94□□□□□ -1.3
USH2AO75445 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 BNIP3P1-202ENST00000550043 1585 ntBASIC6.93□□□□□ -1.3
USH2AO75445 CYP2AB1P-202ENST00000454440 1456 ntBASIC6.93□□□□□ -1.3
USH2AO75445 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 CHMP1AP1-201ENST00000445563 662 ntBASIC6.93□□□□□ -1.3
USH2AO75445 BUD31-205ENST00000456893 512 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 EID1-202ENST00000560490 584 ntTSL 3 BASIC6.93□□□□□ -1.3
USH2AO75445 ELP5-212ENST00000574255 671 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms