Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD2O14647 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHD2O14647 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD2O14647 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 Z97180.1-201ENST00000445173 988 ntBASIC21.59■■□□□ 1.05
CHD2O14647 AC025181.2-201ENST00000606994 802 ntBASIC21.59■■□□□ 1.05
CHD2O14647 AL805961.1-203ENST00000641078 1258 ntBASIC21.59■■□□□ 1.05
CHD2O14647 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD2O14647 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD2O14647 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHD2O14647 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD2O14647 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD2O14647 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 MIR648-201ENST00000385046 94 ntBASIC21.59■■□□□ 1.05
CHD2O14647 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.59■■□□□ 1.05
CHD2O14647 CTBP2P4-201ENST00000513884 920 ntBASIC21.59■■□□□ 1.05
CHD2O14647 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD2O14647 CFL1-206ENST00000527344 962 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD2O14647 AC005324.6-201ENST00000587972 613 ntBASIC21.59■■□□□ 1.05
CHD2O14647 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CHD2O14647 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD2O14647 AC004899.1-201ENST00000424687 1714 ntBASIC21.58■■□□□ 1.05
CHD2O14647 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.58■■□□□ 1.05
CHD2O14647 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD2O14647 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD2O14647 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.58■■□□□ 1.05
CHD2O14647 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD2O14647 AC125604.1-201ENST00000496255 707 ntBASIC21.58■■□□□ 1.05
CHD2O14647 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC21.58■■□□□ 1.05
CHD2O14647 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.58■■□□□ 1.05
CHD2O14647 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.58■■□□□ 1.04
CHD2O14647 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.58■■□□□ 1.04
CHD2O14647 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD2O14647 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 MIR3147-201ENST00000577811 66 ntBASIC21.57■■□□□ 1.04
CHD2O14647 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC21.57■■□□□ 1.04
CHD2O14647 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 PFN2-202ENST00000423691 911 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD2O14647 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.57■■□□□ 1.04
CHD2O14647 FGFR3P1-201ENST00000449999 601 ntBASIC21.57■■□□□ 1.04
CHD2O14647 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC21.57■■□□□ 1.04
CHD2O14647 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD2O14647 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD2O14647 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD2O14647 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD2O14647 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHD2O14647 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.56■■□□□ 1.04
CHD2O14647 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CHD2O14647 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD2O14647 AP001094.4-201ENST00000579008 2176 ntBASIC21.56■■□□□ 1.04
CHD2O14647 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD2O14647 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC21.56■■□□□ 1.04
CHD2O14647 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CHD2O14647 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 AC004066.1-201ENST00000502488 802 ntBASIC21.56■■□□□ 1.04
CHD2O14647 LY6E-208ENST00000520531 490 ntTSL 2 BASIC21.56■■□□□ 1.04
CHD2O14647 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD2O14647 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms