Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXN3O00409 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXN3O00409 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.07■□□□□ 0.32
FOXN3O00409 AC023141.5-201ENST00000458585 616 ntBASIC17.07■□□□□ 0.32
FOXN3O00409 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXN3O00409 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXN3O00409 AC097359.3-201ENST00000603982 1210 ntBASIC17.07■□□□□ 0.32
FOXN3O00409 AL133215.2-201ENST00000609242 977 ntBASIC17.07■□□□□ 0.32
FOXN3O00409 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 AC087481.3-201ENST00000602886 1894 ntBASIC17.07■□□□□ 0.32
FOXN3O00409 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 TMBIM7P-203ENST00000641617 1718 ntBASIC17.07■□□□□ 0.32
FOXN3O00409 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
FOXN3O00409 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 AL596257.1-201ENST00000641463 2694 ntBASIC17.06■□□□□ 0.32
FOXN3O00409 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXN3O00409 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FOXN3O00409 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FOXN3O00409 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 AZGP1P1-201ENST00000411909 902 ntBASIC17.06■□□□□ 0.32
FOXN3O00409 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
FOXN3O00409 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXN3O00409 MIR4453-201ENST00000584019 89 ntBASIC17.06■□□□□ 0.32
FOXN3O00409 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 RN7SL828P-201ENST00000607615 303 ntBASIC17.06■□□□□ 0.32
FOXN3O00409 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FOXN3O00409 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXN3O00409 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXN3O00409 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.05■□□□□ 0.32
FOXN3O00409 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXN3O00409 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXN3O00409 TSPY26P-202ENST00000565928 3884 ntBASIC17.05■□□□□ 0.32
FOXN3O00409 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXN3O00409 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FOXN3O00409 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
FOXN3O00409 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXN3O00409 CNN2P11-201ENST00000429351 262 ntBASIC17.05■□□□□ 0.32
FOXN3O00409 AP006288.1-201ENST00000446065 395 ntBASIC17.05■□□□□ 0.32
FOXN3O00409 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXN3O00409 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXN3O00409 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXN3O00409 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms