Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
O00370 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
O00370 AC107890.1-201ENST00000422478 521 ntBASIC17.02■□□□□ 0.32
O00370 PMS2P2-201ENST00000425039 1128 ntBASIC17.02■□□□□ 0.32
O00370 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
O00370 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
O00370 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.02■□□□□ 0.31
O00370 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
O00370 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
O00370 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.02■□□□□ 0.31
O00370 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
O00370 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
O00370 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
O00370 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
O00370 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
O00370 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.01■□□□□ 0.31
O00370 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.01■□□□□ 0.31
O00370 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.01■□□□□ 0.31
O00370 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
O00370 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.01■□□□□ 0.31
O00370 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.01■□□□□ 0.31
O00370 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
O00370 AL645939.2-201ENST00000427340 991 ntBASIC17.01■□□□□ 0.31
O00370 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
O00370 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.01■□□□□ 0.31
O00370 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.01■□□□□ 0.31
O00370 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 AL079307.3-201ENST00000556114 283 ntBASIC17.01■□□□□ 0.31
O00370 AC140878.1-201ENST00000565277 250 ntBASIC17.01■□□□□ 0.31
O00370 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
O00370 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.01■□□□□ 0.31
O00370 SPDYE12P-201ENST00000618416 771 ntBASIC17.01■□□□□ 0.31
O00370 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
O00370 AL136379.1-201ENST00000623471 2642 ntBASIC17.01■□□□□ 0.31
O00370 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
O00370 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.01■□□□□ 0.31
O00370 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
O00370 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
O00370 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.01■□□□□ 0.31
O00370 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
O00370 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
O00370 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
O00370 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17■□□□□ 0.31
O00370 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
O00370 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
O00370 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
O00370 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17■□□□□ 0.31
O00370 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17■□□□□ 0.31
O00370 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 FES-204ENST00000414248 2327 ntTSL 2 BASIC17■□□□□ 0.31
O00370 AL080243.2-201ENST00000418783 582 ntBASIC17■□□□□ 0.31
O00370 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17■□□□□ 0.31
O00370 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 KRT8P37-201ENST00000451609 1420 ntBASIC17■□□□□ 0.31
O00370 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
O00370 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17■□□□□ 0.31
O00370 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17■□□□□ 0.31
O00370 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17■□□□□ 0.31
O00370 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms