Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AL596087.1-201ENST00000400979 1969 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 GAPDHP21-201ENST00000450301 1010 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AC010336.2-201ENST00000564226 506 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AC104794.3-201ENST00000566840 1248 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 KRT8P12-202ENST00000472924 1397 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 BTBD7P1-201ENST00000447253 1453 ntBASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA3F8WFD2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AL596325.1-201ENST00000563991 1082 ntBASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AL033527.5-202ENST00000641632 1098 ntBASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA3F8WFD2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 DOC2GP-204ENST00000639052 2548 ntBASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms