Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AJ011931.1-201ENST00000618749 2492 ntBASIC15.16■□□□□ 0.02
AP4S1Q9Y587 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 AC009090.5-201ENST00000624886 2285 ntBASIC15.15■□□□□ 0.02
AP4S1Q9Y587 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 PTCHD3P3-201ENST00000403073 906 ntBASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 DRAXINP1-201ENST00000437611 948 ntBASIC15.15■□□□□ 0.02
AP4S1Q9Y587 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4S1Q9Y587 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.15■□□□□ 0.02
AP4S1Q9Y587 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 KRT18P57-201ENST00000443599 1254 ntBASIC15.14■□□□□ 0.01
AP4S1Q9Y587 AC245100.5-201ENST00000452108 331 ntBASIC15.14■□□□□ 0.01
AP4S1Q9Y587 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4S1Q9Y587 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 CICP14-201ENST00000629111 2732 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms