Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 AC006449.6-201ENST00000612330 2296 ntBASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.73□□□□□ -0.05
RPH3AQ9Y2J0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 AL592424.1-201ENST00000563624 1536 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 AL513523.2-202ENST00000427283 2040 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 MIR943-201ENST00000401286 94 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 RNA5SP421-201ENST00000516864 134 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 IGHV3-42-201ENST00000520410 361 ntBASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPH3AQ9Y2J0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 TREML5P-201ENST00000421694 576 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AC007274.1-201ENST00000439805 662 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AC051619.7-201ENST00000568314 623 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AC061975.2-201ENST00000581722 295 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AC015911.4-201ENST00000588022 1070 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AL365330.1-201ENST00000607459 531 ntBASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms