Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PMS2P4-201ENST00000412466 1052 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 IGLL3P-201ENST00000412472 434 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC007967.2-201ENST00000432613 625 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RHOQP3-201ENST00000437982 621 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RNA5SP416-201ENST00000516838 111 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC106730.1-201ENST00000566722 1090 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC021097.1-201ENST00000607902 574 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC064836.3-201ENST00000607928 673 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC027601.4-201ENST00000611259 610 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC010507.1-201ENST00000633895 436 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AL031731.1-201ENST00000642131 2094 ntBASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CICP14-201ENST00000629111 2732 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 HMGA1P7-201ENST00000406908 502 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 AC020765.3-201ENST00000613051 740 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 AC004877.2-201ENST00000623941 599 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 BCAR1-209ENST00000546196 1340 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CICP23-201ENST00000605013 2741 ntBASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms