Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHANK2Q9UPX8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 FXNP2-201ENST00000411625 547 ntBASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 AC006033.1-201ENST00000440505 426 ntBASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 KRT8P13-201ENST00000463294 1010 ntBASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 RN7SL48P-201ENST00000579283 293 ntBASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 AC112504.1-201ENST00000623415 1841 ntBASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC23.25■■□□□ 1.31
SHANK2Q9UPX8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC007969.1-201ENST00000433675 447 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 CNN2P10-201ENST00000443067 918 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 HNRNPA1P48-202ENST00000565308 961 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC006453.4-201ENST00000636949 1252 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC084364.1-201ENST00000551967 1556 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 SLC25A24P2-201ENST00000415059 510 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 Z93015.1-201ENST00000451718 390 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 EEF1DP1-201ENST00000585891 896 ntBASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHANK2Q9UPX8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 CD8B2-202ENST00000417670 633 ntBASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 ABBA01031663.1-201ENST00000635630 790 ntBASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHANK2Q9UPX8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms