Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 BAATP1-201ENST00000412284 1225 ntBASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 AC104306.2-201ENST00000451877 341 ntBASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 TMEM198B-204ENST00000484016 896 ntBASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 MIR3619-201ENST00000579667 83 ntBASIC29.99■■■□□ 2.39
SHROOM4Q9ULL8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 MIR326-201ENST00000362220 95 ntBASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 HNRNPUP1-201ENST00000554987 333 ntBASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 AL049840.4-201ENST00000602422 811 ntBASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM4Q9ULL8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC29.97■■■□□ 2.39
SHROOM4Q9ULL8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 HINT2P1-201ENST00000419438 481 ntBASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 HADH-212ENST00000638621 741 ntTSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SHROOM4Q9ULL8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 AL591846.1-201ENST00000451736 433 ntBASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 CHMP4BP1-201ENST00000556017 588 ntBASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 AC005252.2-201ENST00000624630 1141 ntBASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM4Q9ULL8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 AL607033.1-201ENST00000623900 1599 ntBASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 PCDHA14-201ENST00000506751 2298 ntBASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 LTB4R2-202ENST00000528054 3092 ntBASIC29.95■■■□□ 2.38
SHROOM4Q9ULL8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms