Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AC024909.3-201ENST00000611513 2257 ntBASIC16.81■□□□□ 0.28
CDH9Q9ULB4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH9Q9ULB4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 TOMM22P5-201ENST00000416399 439 ntBASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 RARRES2P5-201ENST00000564013 466 ntBASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AC025048.6-201ENST00000634326 1161 ntBASIC16.8■□□□□ 0.28
CDH9Q9ULB4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AL513523.2-202ENST00000427283 2040 ntBASIC16.8■□□□□ 0.28
CDH9Q9ULB4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH9Q9ULB4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 KRT18P64-201ENST00000434946 1219 ntBASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 MIR4313-201ENST00000580760 101 ntBASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 CHCHD2P3-201ENST00000603038 451 ntBASIC16.79■□□□□ 0.28
CDH9Q9ULB4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AL358472.5-202ENST00000641448 1267 ntBASIC16.79■□□□□ 0.28
CDH9Q9ULB4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH9Q9ULB4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH9Q9ULB4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CDH9Q9ULB4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH9Q9ULB4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH9Q9ULB4 FER1L4-210ENST00000615531 5998 ntBASIC16.78■□□□□ 0.28
CDH9Q9ULB4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms