Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AL391825.1-201ENST00000457671 1364 ntBASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 DBET-201ENST00000630918 3363 ntBASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 ME2P1-201ENST00000426028 1970 ntBASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC087499.6-201ENST00000411576 835 ntBASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AL359881.2-201ENST00000602973 570 ntBASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HDAC6Q9UBN7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 AC144831.1-201ENST00000573312 2656 ntBASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 AC093004.1-201ENST00000508850 424 ntBASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 WASH4P-201ENST00000564273 1246 ntBASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 AC008494.3-201ENST00000606615 944 ntBASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC6Q9UBN7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms