Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 AC011477.6-201ENST00000604980 1927 ntBASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 REXO1L1P-202ENST00000608646 1974 ntBASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 YBX1P6-201ENST00000442962 1002 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PHKG1P2-201ENST00000457537 863 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 RNA5SP423-201ENST00000517127 109 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PTP4A1P2-201ENST00000546033 454 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 BRI3BPP1-201ENST00000594224 787 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 AC009542.2-202ENST00000619004 1067 ntBASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM7Q9NR12 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AC079328.2-201ENST00000561241 3354 ntBASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AL603832.2-201ENST00000566195 2125 ntBASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AC010328.2-201ENST00000597698 1111 ntBASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AC097359.3-201ENST00000603982 1210 ntBASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 AC112504.1-201ENST00000623415 1841 ntBASIC17.68■□□□□ 0.42
PDLIM7Q9NR12 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC074338.1-201ENST00000416825 156 ntBASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 RPL13AP20-201ENST00000459725 609 ntBASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms