Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 LINC01225-203ENST00000563550 1244 ntBASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AL135744.1-201ENST00000565098 629 ntBASIC13.63□□□□□ -0.23
SEBOXQ9HB31 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AC026120.1-201ENST00000611536 926 ntBASIC13.63□□□□□ -0.23
SEBOXQ9HB31 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.63□□□□□ -0.23
SEBOXQ9HB31 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AP001282.1-201ENST00000531301 1499 ntBASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AC243562.1-201ENST00000560672 389 ntBASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AC027307.2-201ENST00000591252 911 ntBASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AC023908.3-201ENST00000564211 3047 ntBASIC13.62□□□□□ -0.23
SEBOXQ9HB31 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEBOXQ9HB31 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.61□□□□□ -0.23
SEBOXQ9HB31 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 MIR600HG-201ENST00000449175 5984 ntBASIC13.61□□□□□ -0.23
SEBOXQ9HB31 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 AC011477.6-201ENST00000604980 1927 ntBASIC13.61□□□□□ -0.23
SEBOXQ9HB31 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.61□□□□□ -0.23
SEBOXQ9HB31 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms