Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 RNU4-21P-201ENST00000362802 126 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 OR1L1-202ENST00000373686 1083 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 GK-202ENST00000378941 458 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 ST13P16-201ENST00000401760 781 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MIR548I3-201ENST00000408378 149 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MIR548I1-201ENST00000408810 149 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IGKV1OR2-3-201ENST00000411475 288 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CBX3P6-201ENST00000430257 527 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 SPTLC1P4-201ENST00000435997 260 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC006326.1-201ENST00000445465 787 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CABYRP1-201ENST00000465493 1045 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DPY19L2P4-201ENST00000479881 442 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MIR3149-201ENST00000584629 83 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 NDUFV2P1-201ENST00000596415 907 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AP000894.4-201ENST00000610185 483 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AL589743.7-201ENST00000612637 233 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MIR6722-201ENST00000617286 78 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AL109936.8-201ENST00000641772 604 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AFG3L1P-217ENST00000557444 2447 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 AP003035.1-201ENST00000533748 1417 ntBASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 AC089987.2-201ENST00000328207 936 ntBASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 TBC1D3P3-201ENST00000342824 1080 ntBASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 Y_RNA.618-201ENST00000410949 107 ntBASIC10.07□□□□□ -0.8
KRTAP3-2Q9BYR7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms