Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC8.14□□□□□ -1.11
KRTAP4-1Q9BYQ7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-1Q9BYQ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
KRTAP4-1Q9BYQ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC092364.2-201ENST00000596710 2692 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 HNRNPA1P32-201ENST00000396326 963 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RNA5SP486-201ENST00000515961 83 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RN7SL190P-201ENST00000582519 257 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 EEF1DP1-201ENST00000585891 896 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC097724.1-201ENST00000609581 426 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC132938.4-201ENST00000623835 848 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC015818.8-201ENST00000587907 1519 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 AC138028.6-201ENST00000616106 1482 ntBASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
KRTAP4-1Q9BYQ7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 AL133267.1-201ENST00000398220 340 ntBASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
KRTAP4-1Q9BYQ7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms