Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ABCA3Q99758 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.66■□□□□ 0.9
ABCA3Q99758 AP001094.4-201ENST00000579008 2176 ntBASIC20.66■□□□□ 0.9
ABCA3Q99758 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.66■□□□□ 0.9
ABCA3Q99758 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ABCA3Q99758 RN7SKP175-201ENST00000408472 289 ntBASIC20.66■□□□□ 0.9
ABCA3Q99758 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.66■□□□□ 0.9
ABCA3Q99758 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.66■□□□□ 0.9
ABCA3Q99758 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.66■□□□□ 0.9
ABCA3Q99758 AC011491.1-203ENST00000637688 543 ntBASIC20.66■□□□□ 0.9
ABCA3Q99758 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ABCA3Q99758 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA3Q99758 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.66■□□□□ 0.9
ABCA3Q99758 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.65■□□□□ 0.9
ABCA3Q99758 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ABCA3Q99758 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ABCA3Q99758 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.65■□□□□ 0.9
ABCA3Q99758 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.65■□□□□ 0.9
ABCA3Q99758 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 AC125604.1-201ENST00000496255 707 ntBASIC20.65■□□□□ 0.9
ABCA3Q99758 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.65■□□□□ 0.9
ABCA3Q99758 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ABCA3Q99758 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ABCA3Q99758 MIR4313-201ENST00000580760 101 ntBASIC20.65■□□□□ 0.9
ABCA3Q99758 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.65■□□□□ 0.9
ABCA3Q99758 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.65■□□□□ 0.9
ABCA3Q99758 AC004466.1-201ENST00000599515 1080 ntBASIC20.65■□□□□ 0.9
ABCA3Q99758 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ABCA3Q99758 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.65■□□□□ 0.9
ABCA3Q99758 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 AC106886.4-201ENST00000623557 2502 ntBASIC20.65■□□□□ 0.9
ABCA3Q99758 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.65■□□□□ 0.9
ABCA3Q99758 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA3Q99758 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ABCA3Q99758 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ABCA3Q99758 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ABCA3Q99758 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.64■□□□□ 0.9
ABCA3Q99758 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ABCA3Q99758 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ABCA3Q99758 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.64■□□□□ 0.9
ABCA3Q99758 AC011742.3-201ENST00000439053 820 ntBASIC20.64■□□□□ 0.9
ABCA3Q99758 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.64■□□□□ 0.9
ABCA3Q99758 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.9
ABCA3Q99758 AC009955.4-201ENST00000597192 544 ntBASIC20.64■□□□□ 0.9
ABCA3Q99758 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.64■□□□□ 0.9
ABCA3Q99758 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.64■□□□□ 0.9
ABCA3Q99758 MIR6756-201ENST00000616240 63 ntBASIC20.64■□□□□ 0.9
ABCA3Q99758 AL805961.1-203ENST00000641078 1258 ntBASIC20.64■□□□□ 0.9
ABCA3Q99758 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ABCA3Q99758 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ABCA3Q99758 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 ALOX12P2-203ENST00000570921 1945 ntBASIC20.64■□□□□ 0.89
ABCA3Q99758 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ABCA3Q99758 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
ABCA3Q99758 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.64■□□□□ 0.89
ABCA3Q99758 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ABCA3Q99758 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.64■□□□□ 0.89
ABCA3Q99758 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.64■□□□□ 0.89
ABCA3Q99758 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.64■□□□□ 0.89
ABCA3Q99758 AL023803.2-201ENST00000620080 638 ntBASIC20.64■□□□□ 0.89
ABCA3Q99758 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA3Q99758 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 CLUHP2-201ENST00000426660 1303 ntBASIC20.63■□□□□ 0.89
ABCA3Q99758 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms