Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.71□□□□□ -0.54
MUC4Q99102 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
MUC4Q99102 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MUC4Q99102 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
MUC4Q99102 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
MUC4Q99102 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
MUC4Q99102 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.7□□□□□ -0.54
MUC4Q99102 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 AL136379.1-201ENST00000623471 2642 ntBASIC11.7□□□□□ -0.54
MUC4Q99102 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.7□□□□□ -0.54
MUC4Q99102 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.7□□□□□ -0.54
MUC4Q99102 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 BCAR1-209ENST00000546196 1340 ntBASIC11.7□□□□□ -0.54
MUC4Q99102 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 AC091951.1-201ENST00000512854 2465 ntBASIC11.7□□□□□ -0.54
MUC4Q99102 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 AC138035.3-201ENST00000622706 2791 ntBASIC11.7□□□□□ -0.54
MUC4Q99102 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.7□□□□□ -0.54
MUC4Q99102 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.7□□□□□ -0.54
MUC4Q99102 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
MUC4Q99102 AC020658.6-201ENST00000623564 1870 ntBASIC11.7□□□□□ -0.54
MUC4Q99102 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MUC4Q99102 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 ALG1L5P-201ENST00000482043 771 ntBASIC11.69□□□□□ -0.54
MUC4Q99102 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.69□□□□□ -0.54
MUC4Q99102 PRYP6-201ENST00000514804 343 ntBASIC11.69□□□□□ -0.54
MUC4Q99102 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC106028.4-201ENST00000614509 607 ntBASIC11.69□□□□□ -0.54
MUC4Q99102 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC092902.6-201ENST00000641783 218 ntBASIC11.69□□□□□ -0.54
MUC4Q99102 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 AC023157.3-201ENST00000619086 2088 ntBASIC11.69□□□□□ -0.54
MUC4Q99102 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
MUC4Q99102 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
MUC4Q99102 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MUC4Q99102 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.69□□□□□ -0.54
MUC4Q99102 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.69□□□□□ -0.54
MUC4Q99102 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms