Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 AC024909.3-201ENST00000611513 2257 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 AC022188.1-201ENST00000620960 1664 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13□□□□□ -0.33
ZNF48Q96MX3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13□□□□□ -0.33
ZNF48Q96MX3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13□□□□□ -0.33
ZNF48Q96MX3 AC055876.2-201ENST00000531834 546 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 TPRX2P-201ENST00000535362 881 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 HILS1-202ENST00000545329 423 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 MIR6069-201ENST00000620069 79 ntBASIC13□□□□□ -0.33
ZNF48Q96MX3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13□□□□□ -0.33
ZNF48Q96MX3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF48Q96MX3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13□□□□□ -0.33
ZNF48Q96MX3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms