Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 MIR1227-201ENST00000408484 88 ntBASIC17.18■□□□□ 0.34
LRCH3Q96II8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 AC093724.1-201ENST00000448659 1027 ntBASIC17.18■□□□□ 0.34
LRCH3Q96II8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.18■□□□□ 0.34
LRCH3Q96II8 AC138951.2-201ENST00000623455 1161 ntBASIC17.18■□□□□ 0.34
LRCH3Q96II8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRCH3Q96II8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH3Q96II8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.17■□□□□ 0.34
LRCH3Q96II8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.17■□□□□ 0.34
LRCH3Q96II8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH3Q96II8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH3Q96II8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 RN7SL11P-201ENST00000471305 293 ntBASIC17.16■□□□□ 0.34
LRCH3Q96II8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms