Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AC012640.2-201ENST00000561606 901 ntBASIC13.9□□□□□ -0.18
CCDC107Q8WV48 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AC008667.4-201ENST00000607370 168 ntBASIC13.9□□□□□ -0.18
CCDC107Q8WV48 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AC005593.1-201ENST00000624894 515 ntBASIC13.9□□□□□ -0.18
CCDC107Q8WV48 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 CICP13-201ENST00000422015 2789 ntBASIC13.9□□□□□ -0.18
CCDC107Q8WV48 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 GRK6P1-201ENST00000400595 1711 ntBASIC13.9□□□□□ -0.18
CCDC107Q8WV48 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC107Q8WV48 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCDC107Q8WV48 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CCDC107Q8WV48 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AC004790.2-201ENST00000623588 572 ntBASIC13.89□□□□□ -0.19
CCDC107Q8WV48 AC148477.8-201ENST00000624298 468 ntBASIC13.89□□□□□ -0.19
CCDC107Q8WV48 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC107Q8WV48 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 GPAA1P2-202ENST00000606848 1787 ntBASIC13.88□□□□□ -0.19
CCDC107Q8WV48 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 AC005089.1-201ENST00000619486 2241 ntBASIC13.88□□□□□ -0.19
CCDC107Q8WV48 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCDC107Q8WV48 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms