Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.35■□□□□ 0.21
RTL3Q8N8U3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 BASP1P1-201ENST00000430708 665 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC093214.1-201ENST00000511688 1107 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ZNF890P-202ENST00000530367 1156 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 MIR4313-201ENST00000580760 101 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC025048.3-201ENST00000590609 569 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC005702.4-201ENST00000618393 416 ntBASIC16.34■□□□□ 0.21
RTL3Q8N8U3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTL3Q8N8U3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
RTL3Q8N8U3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RTL3Q8N8U3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTL3Q8N8U3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTL3Q8N8U3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.33■□□□□ 0.21
RTL3Q8N8U3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC009477.1-201ENST00000452936 217 ntBASIC16.33■□□□□ 0.2
RTL3Q8N8U3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC004890.2-204ENST00000481968 304 ntBASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTL3Q8N8U3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 AP003680.1-201ENST00000598970 3660 ntBASIC16.32■□□□□ 0.2
RTL3Q8N8U3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.32■□□□□ 0.2
RTL3Q8N8U3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms